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HEIRENDT Laurent

ORCID
0000-0003-1861-0037
Main Referenced Co-authors
SCHNEIDER, Reinhard  (5)
THIELE, Ines  (5)
SATAGOPAM, Venkata Pardhasaradhi  (4)
FLEMING, Ronan MT  (3)
HEINKEN, Almut Katrin  (3)
Main Referenced Keywords
systems biomedicine (2); Bearing overheating (1); Bingham grease (1); Biochemistry (1); Biotechnology (1);
Main Referenced Unit & Research Centers
Luxembourg Centre for Systems Biomedicine (LCSB): Bioinformatics Core (R. Schneider Group) (3)
ULHPC - University of Luxembourg: High Performance Computing (2)
Luxembourg Centre for Systems Biomedicine (LCSB): Molecular Systems Physiology (Thiele Group) (1)
Luxembourg Centre for Systems Biomedicine (LCSB): Systems Biochemistry (Fleming Group) (1)
Main Referenced Disciplines
Life sciences: Multidisciplinary, general & others (6)
Aerospace & aeronautics engineering (4)
Biotechnology (4)
Engineering, computing & technology: Multidisciplinary, general & others (2)
Biochemistry, biophysics & molecular biology (2)

Publications (total 14)

The most downloaded
383 downloads
Noronha, A., Modamio Chamarro, J., Jarosz, Y., Guerard, E., Sompairac, N., Preciat Gonzalez, G. A., Danielsdottir, A. D., Krecke, M., Merten, D., Haraldsdottir, H., Heinken, A. K., Heirendt, L., Magnusdottir, S., Ravcheev, D., Sahoo, S., Gawron, P., Friscioni, L., Garcia Santa Cruz, B., Prendergast, M., ... Thiele, I. (2018). The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Research. doi:10.1093/nar/gky992 https://hdl.handle.net/10993/37074

The most cited

616 citations (Scopus®)

Heirendt, L., Arreckx, S., Pfau, T., Mendoza, S. N., Richelle, A., Heinken, A. K., Haraldsdottir, H. S., Wachowiak, J., Keating, S. M., Vlasov, V., Magnusdottir, S., Ng, C. Y., Preciat, G., Zagare, A., Chan, S. H. J., Aurich, M. K., Clancy, C. M., Modamio, J., Sauls, J. T., ... Fleming, R. M. T. (2019). Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nature Protocols, 14 (3), 639-702. doi:10.1038/s41596-018-0098-2 https://hdl.handle.net/10993/39264

Gawron, P., Hoksza, D., Piñero, J., Peña-Chilet, M., Esteban-Medina, M., Fernandez-Rueda, J. L., Colonna, V., Smula, E., HEIRENDT, L., Ancien, F., GROUES, V., SATAGOPAM, V., SCHNEIDER, R., Dopazo, J., Furlong, L. I., & OSTASZEWSKI, M. (2023). Visualization of automatically combined disease maps and pathway diagrams for rare diseases. Frontiers in Bioinformatics, 3, 1101505. doi:10.3389/fbinf.2023.1101505
Peer reviewed

Kratochvil, M.* , Heirendt, L.* , Wilken, S. E., Pusa, T., Arreckx, S., Noronha, A., van Aalst, M., Satagopam, V., Ebenhöh, O., Schneider, R., Trefois, C., & Gu, W. (2021). COBREXA.jl: constraint-based reconstruction and exascale analysis. Bioinformatics. doi:10.1093/bioinformatics/btab782
Peer reviewed
* These authors have contributed equally to this work.

Ostaszewski, M., Niarakis, A., Mazein, A., Kuperstein, I., Phair, R., Orta-Resendiz, A., Singh, V., Aghamiri, S. S., Acencio, M. L., Glaab, E., Ruepp, A., Fobo, G., Montrone, C., Brauner, B., Frishman, G., Monraz Gómez, L. C., Somers, J., Hoch, M., Kumar Gupta, S., ... Schneider, R. (2021). COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular Systems Biology, 17 (10), 10387. doi:10.15252/msb.202110387
Peer Reviewed verified by ORBi

Richelle, A., Kellman, B. P., Wenzel, A. T., Chiang, A. W. T., Reagan, T., Gutierrez, J. M., Joshi, C., Li, S., Liu, J. K., Masson, H., Lee, J., Li, Z., Heirendt, L., Trefois, C., Juarez, E. F., Bath, T., Borland, D., Mesirov, J. P., Robasky, K., & Lewis, N. E. (2021). Model-based assessment of mammalian cell metabolic functionalities using omics data. Cell reports methods, 1 (3). doi:10.1016/j.crmeth.2021.100040
Peer reviewed

Kratochvil, M.* , Hunewald, O.* , Heirendt, L., Verissimo, V., Vondrášek, J., Satagopam, V., Schneider, R., Trefois, C., & Ollert, M. (18 November 2020). GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets. GigaScience, 9 (11). doi:10.1093/gigascience/giaa127
Peer Reviewed verified by ORBi
* These authors have contributed equally to this work.

Heinken, A. K., Ravcheev, D., Baldini, F., Heirendt, L., Fleming, R. M., & Thiele, I. (2019). Systematic assessment of secondary bile acid metabolism in gut microbes reveals distinct metabolic capabilities in inflammatory bowel disease. Microbiome. doi:10.1186/s40168-019-0689-3
Peer Reviewed verified by ORBi

Heirendt, L., Arreckx, S., Pfau, T., Mendoza, S. N., Richelle, A., Heinken, A. K., Haraldsdottir, H. S., Wachowiak, J., Keating, S. M., Vlasov, V., Magnusdottir, S., Ng, C. Y., Preciat, G., Zagare, A., Chan, S. H. J., Aurich, M. K., Clancy, C. M., Modamio, J., Sauls, J. T., ... Fleming, R. M. T. (2019). Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nature Protocols, 14 (3), 639-702. doi:10.1038/s41596-018-0098-2
Peer Reviewed verified by ORBi

Heirendt, L., Hugh, H. H. T., & Wang, P. (20 December 2018). Lubrication mechanism design for aircraft landing gear bearings.

Baldini, F., Heinken, A. K., Heirendt, L., Magnusdottir, S., Fleming, R., & Thiele, I. (2018). The Microbiome Modeling Toolbox: from microbial interactions to personalized microbial communities. Bioinformatics. doi:10.1093/bioinformatics/bty941
Peer reviewed

Noronha, A., Modamio Chamarro, J., Jarosz, Y., Guerard, E., Sompairac, N., Preciat Gonzalez, G. A., Danielsdottir, A. D., Krecke, M., Merten, D., Haraldsdottir, H., Heinken, A. K., Heirendt, L., Magnusdottir, S., Ravcheev, D., Sahoo, S., Gawron, P., Friscioni, L., Garcia Santa Cruz, B., Prendergast, M., ... Thiele, I. (2018). The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Research. doi:10.1093/nar/gky992
Peer Reviewed verified by ORBi

Heirendt, L., Thiele, I., & Fleming, R. M. (2017). DistributedFBA.jl: High-level, high-performance flux balance analysis in Julia. Bioinformatics. doi:10.1093/bioinformatics/btw838
Peer reviewed

Heirendt, L. (2015). Aircraft landing gear thermo-tribomechanical model development [Doctoral thesis, U of T - University of Toronto]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/38359doi:10.2514/1.C032209

Heirendt, L., Hugh, L., & Wang, P. (February 2015). Aircraft landing gear greased slider bearing steady-state thermo-elastohydrodynamic concept model. Tribology International, 82 (B), 453-463. doi:10.1016/j.triboint.2014.04.001
Peer reviewed

Heirendt, L., Wang, P., & Liu, H. H. T. (2014). Aircraft Landing Gear Thermo-Tribomechanical Model and Sensitivity Study. Journal of Aircraft, 51 (2), 511-519. doi:10.2514/1.C032209
Peer Reviewed verified by ORBi

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