Bauer, E. (2017). Computational ecosystems modeling and analysis of human-associated intestinal microbial communities [Doctoral thesis, Unilu - University of Luxembourg]. ORBilu-University of Luxembourg. https://orbilu.uni.lu/handle/10993/33008 |
Bauer, E.* , Zimmermann, J.* , Baldini, F., Thiele, I., & Kaleta, C. (2017). BacArena: Individual-Based Metabolic Modeling of Heterogeneous Microbes in Complex Communities. PLoS Computational Biology. doi:10.1371/journal.pcbi.1005544 Peer Reviewed verified by ORBi * These authors have contributed equally to this work. |
Magnusdottir, S., Heinken, A. K., Kutt, L., Ravcheev, D., Bauer, E., Noronha, A., Greenhalgh, K., Jäger, C., Baginska, J., Wilmes, P., Fleming, R. M., & Thiele, I. (2016). Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota. Nature Biotechnology. doi:10.1038/nbt.3703 Peer Reviewed verified by ORBi |
Salem, H., Onchuru, T., Bauer, E., & Kaltenpoth, M. (2015). Symbiont transmission entails the risk of parasite infection. Biology Letters. doi:10.1098/rsbl.2015.0840 Peer Reviewed verified by ORBi |
Bauer, E., Lampert, N., Mikaelyan, A., Köhler, T., Maekawa, K., & Brune, A. (2015). Physicochemical conditions, metabolites, and community structure of the bacterial microbiota in the gut of wood-feeding cockroaches (Blaberidae: Panesthiinae). FEMS Microbiology Ecology, 028. doi:10.1093/femsec/fiu028 Peer reviewed |
Ebrahim, A., Almaas, E., Bauer, E., Bordbar, A., Burgard, A. P., Chang, R. L., Dräger, A., Famili, I., Feist, A. M., Fleming, R. M., Fong, S. S., Hatzimanikatis, V., Herrgård, M. J., Holder, A., Hucka, M., Hyduke, D., Jamshidi, N., Lee, S. Y., Le Novère, N., ... Thiele, I. (2015). Do Genome-scale Models Need Exact Solvers or Clearer Standards? Molecular Systems Biology, 11 (10), 1. doi:10.15252/msb.20156157 Peer Reviewed verified by ORBi |
Bauer, E., Laczny, C. C., Magnusdottir, S., Wilmes, P., & Thiele, I. (2015). Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires. Microbiome, 3 (55), 1-13. doi:10.1186/s40168-015-0121-6 Peer Reviewed verified by ORBi |
Bauer, E., Salem, H., Marz, M., Vogel, H., & Kaltenpoth, M. (2014). Transcriptomic immune response of the cotton stainer Dysdercus fasciatus to experimental elimination of vitamin-supplementing intestinal symbionts. PloS one, 9 (12), 114865. doi:10.1371/journal.pone.0114865 Peer reviewed |
Wouters, F. C., Reichelt, M., Glauser, G., Bauer, E., Erb, M., Gershenzon, J., & Vassão, D. G. (2014). Reglucosylation of the benzoxazinoid DIMBOA with inversion of stereochemical configuration is a detoxification strategy in lepidopteran herbivores. Angewandte Chemie, 126 (42), 11502--11506. doi:10.1002/anie.201406643 Peer reviewed |
Salem, H., Bauer, E., Strauss, A. S., Vogel, H., Marz, M., & Kaltenpoth, M. (2014). Vitamin supplementation by gut symbionts ensures metabolic homeostasis in an insect host. Proceedings of the Royal Society. Biological Sciences, 281 (1796), 20141838. doi:10.1098/rspb.2014.1838 Peer Reviewed verified by ORBi |