Reference : From methylation to myelination: epigenomic and transcriptomic profiling of chronic i...
E-prints/Working papers : Already available on another site
Life sciences : Biochemistry, biophysics & molecular biology
http://hdl.handle.net/10993/55270
From methylation to myelination: epigenomic and transcriptomic profiling of chronic inactive demyelinated multiple sclerosis lesions 2023.01.12.523740
English
Tiane, Assia [> >]
Schepers, Melissa [> >]
Reijnders, Rick A. [> >]
Veggel, Lieve Van [> >]
Chenine, Sarah [> >]
Rombaut, Ben [> >]
Dempster, Emma [> >]
Verfaillie, Catherine [> >]
Wasner, Kobi [> >]
Grünewald, Anne mailto [University of Luxembourg > Luxembourg Centre for Systems Biomedicine (LCSB) > Molecular and Functional Neurobiology]
Prickaerts, Jos [> >]
Pishva, Ehsan [> >]
Hellings, Niels [> >]
Hove, Daniel Van Den [> >]
Vanmierlo, Tim [> >]
2023
Cold Spring Harbor Laboratory
No
[en] Introduction In the progressive phase of multiple sclerosis (MS), the hampered differentiation capacity of oligodendrocyte precursor cells (OPCs) eventually results in remyelination failure. We have previously shown that DNA methylation of Id2/Id4 is highly involved in OPC differentiation and remyelination. In this study, we took an unbiased approach by determining genome-wide DNA methylation patterns within chronically demyelinated MS lesions and investigated how certain epigenetic signatures relate to OPC differentiation capacity.Methods We compared genome-wide DNA methylation and transcriptional profiles between chronically demyelinated MS lesions and matched normal-appearing white matter (NAWM), making use of post-mortem brain tissue (n=9/group). DNA methylation differences that inversely correlated with mRNA expression of their corresponding genes were validated for their cell-type specificity in laser-captured OPCs using pyrosequencing. The CRISPR-dCas9-DNMT3a/TET1 system was used to epigenetically edit human-iPSC-derived oligodendrocytes to assess the effect on cellular differentiation.Results Our data show hypermethylation of CpGs within genes that cluster in gene ontologies related to myelination and axon ensheathment. Cell type-specific validation indicates a region-dependent hypermethylation of MBP, encoding for myelin basic protein, in OPCs obtained from white matter lesions compared to NAWM-derived OPCs. By altering the DNA methylation state of specific CpGs within the promotor region of MBP, using epigenetic editing, we show that cellular differentiation can be bidirectionally manipulated using the CRISPR-dCas9-DNMT3a/TET1 system in vitro.Conclusion Our data indicate that OPCs within chronically demyelinated MS lesions acquire an inhibitory phenotype, which translates into hypermethylation of crucial myelination related genes. Altering the epigenetic status of MBP can restore the differentiation capacity of OPCs and possibly boost (re)myelination.Competing Interest StatementThe authors have declared no competing interest.
http://hdl.handle.net/10993/55270
10.1101/2023.01.12.523740
https://www.biorxiv.org/content/early/2023/01/13/2023.01.12.523740
https://www.biorxiv.org/content/10.1101/2023.01.12.523740v1

File(s) associated to this reference

Fulltext file(s):

FileCommentaryVersionSizeAccess
Open access
2023.01.12.523740v1.full.pdfAuthor preprint1.24 MBView/Open

Bookmark and Share SFX Query

All documents in ORBilu are protected by a user license.