Browsing
     by title


0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

or enter first few letters:   
OK
Full Text
Peer Reviewed
See detail(-)-isopinocampheol substituted mesogens: An investigation of the effect of bulky terminal groups in chiral smectic liquid crystals
Yates, Chris; Lagerwall, Jan UL; Nobili, Maurizio et al

in Ferroelectrics (2004), 311

A ferroelectric liquid crystal with an end-substituted (-)-isopinocampheol (IPC) group has been studied in isolation and in mixtures with the antiferroelectric compound EHPOCBC. The samples were studied ... [more ▼]

A ferroelectric liquid crystal with an end-substituted (-)-isopinocampheol (IPC) group has been studied in isolation and in mixtures with the antiferroelectric compound EHPOCBC. The samples were studied with respect to electroclinic coefficients, tilt angles, X-ray layer spacing, dielectric permittivity, spontaneous polarisation and relative birefringence under an applied field. In the pure isopinocampheol substituted compound, the SmA-SmC phase transition appears strongly first order and is associated with a significant increase in effective birefringence. The smectic layer spacing decreases below the transition approximately with the optical tilt. On increased EHPOCBC concentration the change in birefringence across the transition diminishes, until the point at which the mixture adopts an anticlinic SmC(A) phase, and the expected decrease in birefringence is observed. There is very little change in birefringence with field for the IPC compound, whilst EHPOCBC shows a marked increase with increasing field, for a few degrees above the phase transition. The results are analyzed with respect to two models. In one it is proposed that the bulky IPC group disorders the SmA phase by introducing undulations in the smectic layer. These undulations may disappear in the SmC phase due to an antiparallel arrangement of neighbouring molecules. In the other model the bent shape of the mesogen as a whole plays a crucial role in changing the optical properties at the SmA-SmC transition, due to the biased rotation around the molecular axis of inertia. [less ▲]

Detailed reference viewed: 117 (1 UL)
Full Text
Peer Reviewed
See detailIsotope Cluster-Based Compound Matching in Gas Chromatography/ Mass Spectrometry for Non-Targeted Metabolomics
Wegner, André UL; Sapcariu, Sean UL; Weindl, Daniel UL et al

in Analytical Chemistry (2013), 85(8), 4030-4037

Gas chromatography coupled to mass spectrometry (GC/MS) has emerged as a powerful tool in metabolomics studies. A major bottleneck in current data analysis of GC/MS-based metabolomics studies is compound ... [more ▼]

Gas chromatography coupled to mass spectrometry (GC/MS) has emerged as a powerful tool in metabolomics studies. A major bottleneck in current data analysis of GC/MS-based metabolomics studies is compound matching and identification, as current methods generate high rates of false positive and false -negative identifications. This is especially true for data sets containing a high amount of noise. In this work, a novel spectral similarity measure based on the specific fragmentation patterns of electron impact mass spectra is proposed. An important aspect of these algorithmic methods is the handling of noisy data. The performance of the proposed method compared to the dot product, the current gold standard, was evaluated on a complex biological data set. The analysis results showed significant improvements of the proposed method in compound matching and chromatogram alignment compared to the dot product. [less ▲]

Detailed reference viewed: 201 (18 UL)
Full Text
Peer Reviewed
See detailIsotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching.
Slawski, Martin; Hussong, René UL; Tholey, Andreas et al

in BMC Bioinformatics (2012), 13(291),

Background The robust identification of isotope patterns originating from peptides being analyzed through mass spectrometry (MS) is often significantly hampered by noise artifacts and the interference of ... [more ▼]

Background The robust identification of isotope patterns originating from peptides being analyzed through mass spectrometry (MS) is often significantly hampered by noise artifacts and the interference of overlapping patterns arising e.g. from post-translational modifications. As the classification of the recorded data points into either ‘noise’ or ‘signal’ lies at the very root of essentially every proteomic application, the quality of the automated processing of mass spectra can significantly influence the way the data might be interpreted within a given biological context. Results We propose non-negative least squares/non-negative least absolute deviation regression to fit a raw spectrum by templates imitating isotope patterns. In a carefully designed validation scheme, we show that the method exhibits excellent performance in pattern picking. It is demonstrated that the method is able to disentangle complicated overlaps of patterns. Conclusions We find that regularization is not necessary to prevent overfitting and that thresholding is an effective and user-friendly way to perform feature selection. The proposed method avoids problems inherent in regularization-based approaches, comes with a set of well-interpretable parameters whose default configuration is shown to generalize well without the need for fine-tuning, and is applicable to spectra of different platforms. The R package IPPD implements the method and is available from the Bioconductor platform (http://bioconductor.fhcrc.org/help/bioc-views/devel/bioc/html/IPPD.html) [less ▲]

Detailed reference viewed: 86 (0 UL)
Full Text
Peer Reviewed
See detailIsotopologue ratio normalization for non-targeted metabolomics
Weindl, Daniel UL; Wegner, André UL; Jäger, Christian UL et al

in Journal of Chromatography. A (2015), 1389

Robust quantification of analytes is a prerequisite for meaningful metabolomics experiments. In non-targeted metabolomics it is still hard to compare measurements across multiple batches or instruments ... [more ▼]

Robust quantification of analytes is a prerequisite for meaningful metabolomics experiments. In non-targeted metabolomics it is still hard to compare measurements across multiple batches or instruments. For targeted analyses isotope dilution mass spectrometry is used to provide a robust normalization reference. Here, we present an approach that allows for the automated semi-quantification of metabolites relative to a fully stable isotope-labeled metabolite extract. Unlike many previous approaches, we include both identified and unidentified compounds in the data analysis. The internal standards are detected in an automated manner using the non-targeted tracer fate detection algorithm. The ratios of the light and heavy form of these compounds serve as a robust measure to compare metabolite levels across different mass spectrometric platforms. As opposed to other methods which require high resolution mass spectrometers, our methodology works with low resolution mass spectrometers as commonly used in gas chromatography electron impact mass spectrometry (GC–EI-MS)-based metabolomics. We demonstrate the validity of our method by analyzing compound levels in different samples and show that it outperforms conventional normalization approaches in terms of intra- and inter-instrument reproducibility. We show that a labeled yeast metabolite extract can also serve as a reference for mammalian metabolite extracts where complete stable isotope labeling is hard to achieve. [less ▲]

Detailed reference viewed: 156 (17 UL)
Full Text
Peer Reviewed
See detailIsotretinoin and lymecycline treatments modify the skin microbiota in acne
Kelhälä, H.-L.; Aho, Velma UL; Fyhrquist, N. et al

in Experimental Dermatology (2018), 27(1), 30-36

Detailed reference viewed: 47 (0 UL)
Full Text
Peer Reviewed
See detailThe isotropic constant of random polytopes with vertices on convex surfaces
Prochno, Joscha; Thäle, Christoph; Turchi, Nicola UL

in Journal of Complexity (2019), 54

Detailed reference viewed: 25 (1 UL)
Peer Reviewed
See detailIsotropic-isotropic coexistence in mixtures of rods and spheres
Schilling, Tanja UL

Scientific Conference (2007)

Detailed reference viewed: 34 (0 UL)
Full Text
Peer Reviewed
See detailIsotropic-isotropic phase separation in mixtures of rods and spheres: Some aspects of Monte Carlo simulation in the grand canonical ensemble
Jungblut, S.; Binder, K.; Schilling, Tanja UL

in Computer Physics Communications (2008), 179(1-3), 13-16

Detailed reference viewed: 74 (0 UL)
Full Text
Peer Reviewed
See detailIsotropic-nematic interface and wetting in suspensions of colloidal platelets
van der Beek, D.; Reich, H.; van der Schoot, Paul et al

in Physical Review Letters (2006), 111(27), 7825-7835

Detailed reference viewed: 67 (0 UL)
See detailThe isotropic-nematic interface in colloidal suspensions
Schilling, Tanja UL

Presentation (2005)

Detailed reference viewed: 12 (1 UL)
Full Text
Peer Reviewed
See detailIsotropic-nematic interface in suspensions of hard rods: Mean-field properties and capillary waves
Wolfsheimer, S.; Tanase, C.; Shundyak, K. et al

in Physical Review. E : Statistical, Nonlinear, and Soft Matter Physics (2006), 73(6),

Detailed reference viewed: 71 (0 UL)
Peer Reviewed
See detailThe isotropic-nematic interface in suspensions of platelets
Schilling, Tanja UL

Scientific Conference (2006)

Detailed reference viewed: 15 (0 UL)
Full Text
Peer Reviewed
See detailIsotropic-nematic interfacial tension of hard and soft rods: Application of advanced grand canonical biased-sampling techniques
Vink, R. L. C.; Wolfsheimer, S.; Schilling, Tanja UL

in Journal of Chemical Physics (2005), 123(7),

Detailed reference viewed: 87 (0 UL)
Full Text
Peer Reviewed
See detailIsotropic-nematic transition and cholesteric phases of helical Yukawa rods
Kuhnhold, Anja UL; Schilling, Tanja UL

in Journal of Chemical Physics (2016), 145(194904),

We present a Monte Carlo simulation study of helical Yukawa rods as a model for chiral liquid crystal mesogens.To simulate the cholesteric phase, we introduce a newsimulation method that uses softwalls ... [more ▼]

We present a Monte Carlo simulation study of helical Yukawa rods as a model for chiral liquid crystal mesogens.To simulate the cholesteric phase, we introduce a newsimulation method that uses softwalls and self-determined boundary conditions. We observe that the isotropic-nematic phase transition is shifted to lower volume fractions with decreasing salt concentration as well as with increasing internal pitch of the rods. For particular sets of interaction parameters, the sense of the cholesteric pitch inverts, i.e., depending on concentration, mesogens of a given handedness can produce cholesteric phases of both chiral senses. [less ▲]

Detailed reference viewed: 121 (3 UL)
Full Text
Peer Reviewed
See detailIsotropic–isotropic phase separation and spinodal decomposition in liquid crystal–solvent mixtures
Reyes, Catherine UL; Baller, Jörg UL; Araki, Takeaki et al

in Soft Matter (2019), 15

Phase separation in mixtures forming liquid crystal (LC) phases is an important yet under- appreciated phenomenon that can drastically influence the behaviour of a multi-component LC. Here we demonstrate ... [more ▼]

Phase separation in mixtures forming liquid crystal (LC) phases is an important yet under- appreciated phenomenon that can drastically influence the behaviour of a multi-component LC. Here we demonstrate, using polarising microscopy with active cooling as well as differential scanning calorimetry, that the phase diagram for mixtures of the LC-forming compound 4’-n- pentylbiphenyl-4-carbonitrile (5CB) with ethanol is surprisingly complex. Binary mixtures reveal a broad miscibility gap that leads to phase separation between two distinct isotropic phases via spinodal decomposition or nucleation and growth. On further cooling the nematic phase enters on the 5CB-rich side, adding to the complexity. Significantly, water contamination dramatically raises the temperature range of the miscibility gap, bringing up the critical temperature for spinodal de- composition from ∼ 2◦C for the anhydrous case to > 50◦C if just 3 vol.% water is added to the ethanol. We support the experiments with a theoretical treatment that qualitatively reproduces the phase diagrams as well as the transition dynamics, with and without water. Our study highlights the impact of phase separation in LC-forming mixtures, spanning from equilibrium coexistence of multiple liquid phases to non-equilibrium effects due to persistent spatial concentration gradients. [less ▲]

Detailed reference viewed: 132 (28 UL)
Full Text
See detailThe issue of fuzzy concepts in test construction and possible remedies
Ziegler, M.; Kemper, Christoph UL; Lenzner, T.

in European Journal of Psychological Assessment (2015), 31(1), 1-4

Detailed reference viewed: 102 (0 UL)
Full Text
Peer Reviewed
See detailThe issue of NATO ‘out-of-area’ operations: from West Africa to the borders of the Near East
Paravantis, Spero UL

in Centre Virtuel de la Connaissance sur L'europe (2016)

Franco-British Diplomatic games and issues within the Western European Union (WEU) (1954-1982) http://www.cvce.eu/en/recherche/unit-content/-/unit/e7c423ed-a376-4a57-a415-f8519344e558 #4 of 4 texts, which ... [more ▼]

Franco-British Diplomatic games and issues within the Western European Union (WEU) (1954-1982) http://www.cvce.eu/en/recherche/unit-content/-/unit/e7c423ed-a376-4a57-a415-f8519344e558 #4 of 4 texts, which were published to accompany the selection of WEU documents for the above-named project, to establish the relevant institutional and historical background to place these documents in their proper context. Published October 2016 by DEIS, (Formerly the CVCE) University of Luxembourg [less ▲]

Detailed reference viewed: 68 (6 UL)
Full Text
Peer Reviewed
See detailIssue Reframing by Parties: The Effect of Issue Salience and Ownership
Lefevere, Jonas; Sevenans, Julie; Walgrave, Stefaan et al

in Party Politics (2019), 25(4), 507-519

Issue reframing occurs when parties, while addressing an issue, shift the frame toward other policy domains. The literature has found that party issue framing affects how voters think about issues, yet ... [more ▼]

Issue reframing occurs when parties, while addressing an issue, shift the frame toward other policy domains. The literature has found that party issue framing affects how voters think about issues, yet scholars remain largely in the dark as to when and how parties frame issues. The study at hand theorizes and investigates when and how parties reframe issues in their external communication. Drawing on novel Belgian data about parties’ official stances regarding a large number of policy issues combined with their verbal argumentation of why they took this exact position, we test a new theory about the drivers and mechanisms of issue reframing. We find that parties reframe issues in terms of policy domains that are both salient to the general public and that are salient to the party itself—meaning that it has a history of devoting attention to the policy domain and “owns” it. [less ▲]

Detailed reference viewed: 8 (0 UL)
Full Text
Peer Reviewed
See detailIssuer-Free Oblivious Transfer with Access Control Revisited
Rial, Alfredo UL

in Information Processing Letters (2017)

Oblivious transfer with access control (OTAC) is an extension of oblivious transfer where each message is associated with an access control policy. A receiver can obtain a message only if her attributes ... [more ▼]

Oblivious transfer with access control (OTAC) is an extension of oblivious transfer where each message is associated with an access control policy. A receiver can obtain a message only if her attributes satisfy the access control policy for that message. In most schemes, the receiver's attributes are certified by an issuer. Recently, two Issuer-Free OTAC protocols have been proposed. We show that the security definition for Issuer-Free OTAC fulfilled by those schemes poses a problem. Namely, the sender is not able to attest whether a receiver possesses a claimed attribute. Because of this problem, in both Issuer-Free OTAC protocols, any malicious receiver can obtain any message from the sender, regardless of the access control policy associated with the message. To address this problem, we propose a new security definition for Issuer-Free OTAC. Our definition requires the receiver to prove in zero-knowledge to the sender that her attributes fulfill some predicates. Our definition is suitable for settings with multiple issuers because it allows the design of OTAC protocols where the receiver, when accessing a record, can hide the identity of the issuer that certified her attributes. [less ▲]

Detailed reference viewed: 106 (14 UL)